STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_05058Tetratricopeptide repeat protein. (572 aa)    
Predicted Functional Partners:
DICVIV_10304
Acetyltransferase, GNAT family.
    
 
 0.960
DICVIV_07558
Uncharacterized protein.
    
 
 0.935
DICVIV_10979
Acetyltransferase, GNAT family.
   
 
 0.902
DICVIV_09055
Acetyltransferase, GNAT family.
   
 
 0.902
DICVIV_05059
Uncharacterized protein.
 
     0.704
DICVIV_03954
Ribosomal protein L31e.
    
   0.594
DICVIV_02897
Carbohydrate kinase, thermoresistant glucokinase family.
   
 
 0.550
DICVIV_04650
Ribosomal L39 protein.
   
   0.544
DICVIV_04109
Ribosomal protein L32.
   
   0.528
DICVIV_06770
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.527
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.