STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_02964NLE domain protein. (426 aa)    
Predicted Functional Partners:
DICVIV_11871
NOG1_N domain-containing protein.
   
 
 0.995
DICVIV_00190
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.995
DICVIV_04627
Uncharacterized protein.
   
 
 0.993
DICVIV_02531
CP-type G domain-containing protein.
   
 
 0.990
DICVIV_01394
Ribosomal protein S8e.
   
 
 0.987
DICVIV_10552
WD domain, G-beta repeat protein.
   
 
 0.986
DICVIV_05870
DNA-binding protein.
   
 
 0.986
DICVIV_04933
Ribosomal protein L24e.
   
 
 0.984
DICVIV_12706
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.982
DICVIV_12705
Uncharacterized protein.
   
 
 0.982
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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