STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_02416Prenyltransferase and squalene oxidase repeat-containing domain protein. (821 aa)    
Predicted Functional Partners:
DICVIV_12422
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
 
   
 0.559
DICVIV_06892
Ras family protein.
    
 
 0.539
DICVIV_02984
Outer membrane protein, OMP85 family.
      
 0.524
DICVIV_06732
Ras family protein.
    
 
 0.523
DICVIV_06560
Ras family protein.
    
 
 0.523
DICVIV_06739
Ras family protein.
    
 
 0.523
DICVIV_04105
Ras family protein.
    
 
 0.523
DICVIV_04072
Ras family protein.
    
 
 0.523
DICVIV_07176
Helix-loop-helix DNA-binding domain protein.
    
 
 0.512
DICVIV_04509
Helix-loop-helix DNA-binding domain protein.
    
 
 0.512
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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