Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DICVIV_00413 | DICVIV_00545 | A0A0D8Y989 | A0A0D8YB47 | FFD and TFG box motif protein. | YjeF N-terminal domain-containing protein. | 0.808 |
DICVIV_00413 | DICVIV_00787 | A0A0D8Y989 | A0A0D8Y7U1 | FFD and TFG box motif protein. | Ge1_WD40 domain-containing protein. | 0.563 |
DICVIV_00413 | DICVIV_00788 | A0A0D8Y989 | A0A0D8YAA3 | FFD and TFG box motif protein. | Uncharacterized protein. | 0.563 |
DICVIV_00413 | DICVIV_01538 | A0A0D8Y989 | A0A0D8Y669 | FFD and TFG box motif protein. | Dcp2, box A domain protein. | 0.961 |
DICVIV_00413 | DICVIV_03031 | A0A0D8Y989 | A0A0D8Y887 | FFD and TFG box motif protein. | Uncharacterized protein. | 0.773 |
DICVIV_00413 | DICVIV_03287 | A0A0D8Y989 | A0A0D8Y0X5 | FFD and TFG box motif protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. | 0.634 |
DICVIV_00413 | DICVIV_04495 | A0A0D8Y989 | A0A0D8XXY6 | FFD and TFG box motif protein. | Dcp1-like decapping family protein. | 0.926 |
DICVIV_00413 | DICVIV_07530 | A0A0D8Y989 | A0A0D8XRL8 | FFD and TFG box motif protein. | DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.998 |
DICVIV_00413 | LSM1 | A0A0D8Y989 | A0A0D8XZG1 | FFD and TFG box motif protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.703 |
DICVIV_00545 | DICVIV_00413 | A0A0D8YB47 | A0A0D8Y989 | YjeF N-terminal domain-containing protein. | FFD and TFG box motif protein. | 0.808 |
DICVIV_00545 | DICVIV_00787 | A0A0D8YB47 | A0A0D8Y7U1 | YjeF N-terminal domain-containing protein. | Ge1_WD40 domain-containing protein. | 0.877 |
DICVIV_00545 | DICVIV_00788 | A0A0D8YB47 | A0A0D8YAA3 | YjeF N-terminal domain-containing protein. | Uncharacterized protein. | 0.877 |
DICVIV_00545 | DICVIV_01538 | A0A0D8YB47 | A0A0D8Y669 | YjeF N-terminal domain-containing protein. | Dcp2, box A domain protein. | 0.999 |
DICVIV_00545 | DICVIV_03031 | A0A0D8YB47 | A0A0D8Y887 | YjeF N-terminal domain-containing protein. | Uncharacterized protein. | 0.983 |
DICVIV_00545 | DICVIV_03287 | A0A0D8YB47 | A0A0D8Y0X5 | YjeF N-terminal domain-containing protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. | 0.761 |
DICVIV_00545 | DICVIV_04495 | A0A0D8YB47 | A0A0D8XXY6 | YjeF N-terminal domain-containing protein. | Dcp1-like decapping family protein. | 0.997 |
DICVIV_00545 | DICVIV_06886 | A0A0D8YB47 | A0A0D8XTE2 | YjeF N-terminal domain-containing protein. | CAF1 family ribonuclease. | 0.501 |
DICVIV_00545 | DICVIV_07530 | A0A0D8YB47 | A0A0D8XRL8 | YjeF N-terminal domain-containing protein. | DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.999 |
DICVIV_00545 | LSM1 | A0A0D8YB47 | A0A0D8XZG1 | YjeF N-terminal domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.874 |
DICVIV_00787 | DICVIV_00413 | A0A0D8Y7U1 | A0A0D8Y989 | Ge1_WD40 domain-containing protein. | FFD and TFG box motif protein. | 0.563 |
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