STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_01382OTU-like cysteine protease. (661 aa)    
Predicted Functional Partners:
DICVIV_12302
Ribosomal protein S27a.
   
  0.924
DICVIV_12284
Uncharacterized protein.
    
 0.907
DICVIV_08744
Ribosomal L40e family protein.
    
  0.894
DICVIV_06100
Ubiquitin family protein.
   
  0.847
DICVIV_00888
Ubiquitin family protein.
   
  0.847
DICVIV_05629
Uncharacterized protein.
    
  0.840
DICVIV_10877
UBX domain protein.
   
 
 0.773
DICVIV_06603
Nuclear protein localization protein 4 domain protein.
    
 
 0.771
DICVIV_07775
Tyrosine-protein kinase.
   
 0.736
DICVIV_07446
Protein tyrosine kinase.
   
 0.736
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.