STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DICVIV_00803Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
DICVIV_00802
Tub family protein; Belongs to the TUB family.
 
      0.900
DICVIV_00175
Cullin family protein; Belongs to the cullin family.
    
 0.711
DICVIV_06189
Zinc finger, C3HC4 type.
    
  0.625
DICVIV_00768
Uncharacterized protein.
    
  0.624
DICVIV_00124
Putative RING-box protein 1.
    
  0.606
DICVIV_00127
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
     
 0.598
DICVIV_12287
SPRY domain protein.
   
 
  0.588
DICVIV_05419
SH2 domain protein.
   
 
  0.571
DICVIV_01056
Mov34/MPN/PAD-1 family protein.
   
 
  0.564
DICVIV_09590
SH2 domain protein.
   
 
  0.542
Your Current Organism:
Dictyocaulus viviparus
NCBI taxonomy Id: 29172
Other names: D. viviparus, Dictyocaulus sp. AMP-2014, bovine lungworm
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