STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000756795_00213Unannotated protein. (72 aa)    
Predicted Functional Partners:
GCA_000756795_02060
Unannotated protein.
  
 
 0.783
GCA_000756795_01358
Unannotated protein.
     
 0.755
GCA_000756795_01413
Unannotated protein.
    
  0.743
GCA_000756795_00782
Unannotated protein.
    
 0.643
GCA_000756795_00214
Unannotated protein.
       0.523
GCA_000756795_00581
Unannotated protein.
    
  0.487
GCA_000756795_00484
Unannotated protein.
    
  0.478
GCA_000756795_02064
Unannotated protein.
     
 0.471
GCA_000756795_01789
Unannotated protein.
    
  0.460
GCA_000756795_01671
Unannotated protein.
     
 0.459
Your Current Organism:
Erythrobacter vulgaris
NCBI taxonomy Id: 291985
Other names: CIP 108956, E. vulgaris, Erythrobacter vulgaris Ivanova et al. 2006, KMM 3465, strain 022-2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.