STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000756795_00844Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000756795_00843
Unannotated protein.
 
  
 0.982
GCA_000756795_02667
Unannotated protein.
 
  
 0.908
GCA_000756795_00845
Unannotated protein.
 
     0.805
GCA_000756795_00846
Unannotated protein.
 
     0.739
GCA_000756795_00827
Unannotated protein.
  
     0.429
GCA_000756795_02737
Unannotated protein.
  
     0.401
Your Current Organism:
Erythrobacter vulgaris
NCBI taxonomy Id: 291985
Other names: CIP 108956, E. vulgaris, Erythrobacter vulgaris Ivanova et al. 2006, KMM 3465, strain 022-2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.