STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000756795_00932Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_000756795_00933
Unannotated protein.
       0.820
GCA_000756795_00931
Unannotated protein.
       0.811
GCA_000756795_00930
Unannotated protein.
       0.809
GCA_000756795_00929
Unannotated protein.
 
     0.799
GCA_000756795_00928
Unannotated protein.
       0.648
GCA_000756795_01692
Unannotated protein.
  
     0.539
GCA_000756795_02805
Unannotated protein.
  
     0.519
GCA_000756795_00927
Unannotated protein.
       0.517
GCA_000756795_00925
Unannotated protein.
       0.508
GCA_000756795_00926
Unannotated protein.
       0.508
Your Current Organism:
Erythrobacter vulgaris
NCBI taxonomy Id: 291985
Other names: CIP 108956, E. vulgaris, Erythrobacter vulgaris Ivanova et al. 2006, KMM 3465, strain 022-2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.