STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000756795_01307Unannotated protein. (890 aa)    
Predicted Functional Partners:
GCA_000756795_01306
Unannotated protein.
      0.925
GCA_000756795_01305
Unannotated protein.
       0.816
GCA_000756795_01418
Unannotated protein.
 
   
 0.776
GCA_000756795_01544
Unannotated protein.
 
  
 0.686
GCA_000756795_01308
Unannotated protein.
       0.655
GCA_000756795_01330
Unannotated protein.
     
 0.593
GCA_000756795_01304
Unannotated protein.
       0.551
GCA_000756795_00282
Unannotated protein.
     
 0.468
GCA_000756795_00292
Unannotated protein.
     
 0.422
Your Current Organism:
Erythrobacter vulgaris
NCBI taxonomy Id: 291985
Other names: CIP 108956, E. vulgaris, Erythrobacter vulgaris Ivanova et al. 2006, KMM 3465, strain 022-2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.