STRINGSTRING
tetR protein (Burkholderia cepacia) - STRING interaction network
"tetR" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetRannotation not available (210 aa)    
Predicted Functional Partners:
tetA
annotation not available (397 aa)
 
     
  0.702
WL94_34755
annotation not available (215 aa)
   
          0.660
rifR
annotation not available (257 aa)
   
     
  0.657
neo
annotation not available (264 aa)
   
     
  0.566
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1310 aa)
           
  0.503
WL94_05315
annotation not available (595 aa)
         
  0.479
merR
merR- Hg(II)-responsive transcriptional regulator (135 aa)
           
  0.478
WL94_39220
annotation not available (480 aa)
           
  0.478
DM42_7395
annotation not available (500 aa)
           
  0.475
DM42_7282
annotation not available (475 aa)
           
  0.475
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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