Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOI82350.1 | AOI82352.1 | WI67_07745 | WI67_07755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0303 family. | 3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
AOI82350.1 | emrE | WI67_07745 | WI67_07750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0303 family. | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
AOI82352.1 | AOI82350.1 | WI67_07755 | WI67_07745 | 3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0303 family. | 0.676 |
AOI82352.1 | emrE | WI67_07755 | WI67_07750 | 3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
dksA | emrE | WI67_16455 | WI67_07750 | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
emrE | AOI82350.1 | WI67_07750 | WI67_07745 | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0303 family. | 0.791 |
emrE | AOI82352.1 | WI67_07750 | WI67_07755 | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
emrE | dksA | WI67_07750 | WI67_16455 | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | 0.520 |