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DM42_1352 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1352" - xapX: XapX domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1352xapX- XapX domain protein (50 aa)    
Predicted Functional Partners:
WL94_16215
annotation not available (325 aa)
              0.801
DM42_303
annotation not available (153 aa)
 
          0.799
DM42_308
xapX- XapX domain protein (86 aa)
   
          0.784
WL94_37885
annotation not available (629 aa)
 
          0.778
DM42_304
annotation not available (630 aa)
 
          0.778
DM42_7245
annotation not available (632 aa)
 
          0.763
WL94_37875
annotation not available (228 aa)
 
          0.762
WL94_39945
annotation not available (228 aa)
 
          0.761
DM42_302
annotation not available (304 aa)
 
          0.678
DM42_7251
annotation not available (317 aa)
 
          0.674
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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