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yigL protein (Burkholderia cepacia) - STRING interaction network
"yigL" - Hydrolase in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yigLHydrolase; Conserved protein, phosphatase-like domain (274 aa)    
Predicted Functional Partners:
nagE
PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (588 aa)
 
   
  0.688
treS
Alpha-amylase; treS_nterm- trehalose synthase (1136 aa)
         
  0.611
WI67_18195
5’-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates; Belongs to the SurE nucleotidase family (259 aa)
           
  0.579
WI67_09710
5’-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates; Belongs to the SurE nucleotidase family (253 aa)
           
  0.579
WL94_30670
HAD_type_II- haloacid dehalogenase, type II (253 aa)
           
  0.577
WI67_02320
Haloacid dehalogenase; HAD-SF-IA-v3- HAD hydrolase, IA, variant 3 family protein (207 aa)
           
  0.577
WL94_13925
PTS glucose transporter subunit IIA; PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family (860 aa)
 
     
  0.530
WL94_03220
annotation not available (293 aa)
         
  0.528
nadD
annotation not available (218 aa)
         
  0.497
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring; Belongs to the FtsA/MreB family (410 aa)
           
  0.480
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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