STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_03905annotation not available (1010 aa)    
Predicted Functional Partners:
WL94_03900
annotation not available
 
   
 0.981
DM42_6121
annotation not available
 
     0.569
DM42_625
annotation not available
       0.506
DM42_4632
uvrD/REP helicase N-terminal domain protein
       0.499
WL94_11880
2,4-dihydroxyacetophenone dioxygenase
  
     0.492
WL94_31425
annotation not available
  
     0.472
WL94_27730
Uncharacterized protein
  
     0.470
DM42_4199
annotation not available
  
     0.461
WI67_16410
Uncharacterized protein
  
     0.459
WI67_32305
Alpha/beta hydrolase; Lecithin:cholesterol acyltransferase family protein
  
     0.454
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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