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DM42_1872 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1872" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1872Conserved hypothetical protein (372 aa)    
Predicted Functional Partners:
DM42_1873
annotation not available (243 aa)
 
          0.969
DM42_1874
annotation not available (172 aa)
 
          0.957
DM42_1848
annotation not available (278 aa)
   
          0.646
WL94_32760
annotation not available (596 aa)
   
          0.638
DM42_1849
annotation not available (536 aa)
   
          0.632
DM42_1609
annotation not available (229 aa)
   
          0.622
DM42_1608
annotation not available (856 aa)
   
          0.593
DM42_6919
Conserved hypothetical protein (205 aa)
   
          0.567
DM42_1871
Conserved hypothetical protein (213 aa)
              0.561
WL94_31425
annotation not available (713 aa)
   
          0.548
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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