STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgMNegative regulator of flagellin synthesis flgm; flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM (108 aa)    
Predicted Functional Partners:
fliA
Rna polymerase sigma factor, flia/whig family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes
  
 0.999
flgK
flgK_ends: flagellar hook-associated protein FlgK
 
 
 0.987
DM42_1981
annotation not available
 
  
 0.986
fliS
Flagellar secretion chaperone flis; fliS: flagellar protein FliS
  
 
 0.983
cheA
annotation not available
  
 
 0.935
flgA
flgA_cterm: flagella basal body P-ring formation protein FlgA
 
  
 0.932
flgB
Flagellar basal-body rod protein flgb; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
 
  
 0.927
flgC
Flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family
  
  
 0.914
flgD
Flagellar basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein
  
  
 0.912
flgJ
flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ
  
  
 0.892
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (14%) [HD]