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STRINGSTRING
DM42_2162 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2162" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2162Conserved hypothetical protein (247 aa)    
Predicted Functional Partners:
WL94_30170
annotation not available (408 aa)
 
          0.816
WL94_14180
Phasin- phasin family domain protein (194 aa)
   
     
  0.779
DM42_2954
Phasin (PHA-granule associated protein); Phasin- phasin family domain protein (188 aa)
   
     
  0.775
WI67_14170
Uncharacterized protein (195 aa)
   
          0.771
WI67_16665
annotation not available (126 aa)
   
          0.761
WI67_04540
annotation not available (375 aa)
   
          0.753
WI67_21510
annotation not available (269 aa)
   
          0.719
DM42_2153
Uncharacterized protein (107 aa)
   
          0.679
DM42_3538
annotation not available (393 aa)
   
          0.668
WI67_11570
annotation not available (838 aa)
   
          0.648
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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