STRINGSTRING
glcA protein (Burkholderia cepacia) - STRING interaction network
"glcA" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcAannotation not available (566 aa)    
Predicted Functional Partners:
DM42_2319
Conserved hypothetical protein (241 aa)
 
   
  0.919
WL94_14665
annotation not available (481 aa)
 
   
  0.888
WL94_14675
annotation not available (265 aa)
 
   
  0.838
DM42_5714
annotation not available (381 aa)
   
   
  0.755
WL94_29465
annotation not available (384 aa)
   
   
  0.741
WL94_14680
annotation not available (238 aa)
   
   
  0.655
WI67_11530
annotation not available (470 aa)
 
   
  0.644
WL94_16910
Uncharacterized protein (220 aa)
 
   
  0.637
nagE
PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (588 aa)
         
  0.607
WL94_33915
FAD linked oxidase, C-terminal domain protein (1015 aa)
   
   
  0.592
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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