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rfaF protein (Burkholderia cepacia) - STRING interaction network
"rfaF" - heptsyl_trn_II: lipopolysaccharide heptosyltransferase II in Burkholderia cepacia
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfaFheptsyl_trn_II- lipopolysaccharide heptosyltransferase II (345 aa)    
Predicted Functional Partners:
WI67_04315
heptsyl_trn_I- lipopolysaccharide heptosyltransferase I (331 aa)
  0.987
DM42_851
heptsyl_trn_I- lipopolysaccharide heptosyltransferase I (331 aa)
0.954
DM42_2752
annotation not available (394 aa)
 
0.933
WL94_19890
Domain I; rfaE_dom_I- bifunctional protein RfaE, domain I (307 aa)
   
  0.930
WL94_20930
annotation not available (453 aa)
 
 
  0.905
rfaD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (330 aa)
 
   
  0.893
WI67_14470
D,D-heptose 1,7-bisphosphate phosphatase; HAD-SF-IIIA- HAD hydrolase, family IIIA domain protein (187 aa)
     
  0.866
WL94_25350
ADP-D-glycero-D-manno-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (161 aa)
 
   
  0.829
WL94_02995
annotation not available (194 aa)
 
 
 
  0.769
DM42_7140
HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (203 aa)
     
  0.739
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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