Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1211 | DM42_1511 | DM42_1211 | DM42_1511 | annotation not available | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | 0.881 |
DM42_1211 | DM42_3510 | DM42_1211 | DM42_3510 | annotation not available | annotation not available | 0.806 |
DM42_1211 | aceB | DM42_1211 | DM42_3047 | annotation not available | Belongs to the malate synthase family | 0.943 |
DM42_1211 | fumA | DM42_1211 | DM42_2872 | annotation not available | Hydrolyase, tartrate alpha subunit/fumarate, fe-s type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate | 0.981 |
DM42_1211 | kynB | DM42_1211 | DM42_2492 | annotation not available | Arylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation | 0.800 |
DM42_1211 | mqo | DM42_1211 | DM42_4980 | annotation not available | Malate dehydrogenase (quinone); Probable malate:quinone oxidoreductase; Mal_quin_oxido: malate dehydrogenase | 0.935 |
DM42_1211 | oxdD | DM42_1211 | DM42_6184 | annotation not available | annotation not available | 0.803 |
DM42_1211 | ppc | DM42_1211 | DM42_2647 | annotation not available | Phosphoenolpyruvate carboxylase family protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle | 0.645 |
DM42_1511 | DM42_1211 | DM42_1511 | DM42_1211 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | annotation not available | 0.881 |
DM42_1511 | DM42_3510 | DM42_1511 | DM42_3510 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | annotation not available | 0.806 |
DM42_1511 | aceB | DM42_1511 | DM42_3047 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | Belongs to the malate synthase family | 0.943 |
DM42_1511 | fumA | DM42_1511 | DM42_2872 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | Hydrolyase, tartrate alpha subunit/fumarate, fe-s type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate | 0.981 |
DM42_1511 | kynB | DM42_1511 | DM42_2492 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | Arylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation | 0.800 |
DM42_1511 | mqo | DM42_1511 | DM42_4980 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | Malate dehydrogenase (quinone); Probable malate:quinone oxidoreductase; Mal_quin_oxido: malate dehydrogenase | 0.935 |
DM42_1511 | oxdD | DM42_1511 | DM42_6184 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | annotation not available | 0.803 |
DM42_1511 | ppc | DM42_1511 | DM42_2647 | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | Phosphoenolpyruvate carboxylase family protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle | 0.645 |
DM42_3510 | DM42_1211 | DM42_3510 | DM42_1211 | annotation not available | annotation not available | 0.806 |
DM42_3510 | DM42_1511 | DM42_3510 | DM42_1511 | annotation not available | Malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+); Belongs to the malic enzymes family | 0.806 |
DM42_3510 | aceB | DM42_3510 | DM42_3047 | annotation not available | Belongs to the malate synthase family | 0.800 |
DM42_3510 | fumA | DM42_3510 | DM42_2872 | annotation not available | Hydrolyase, tartrate alpha subunit/fumarate, fe-s type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate | 0.804 |
page 1 of 4