Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_2513 | DM42_2988 | DM42_2513 | DM42_2988 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | annotation not available | 0.407 |
| DM42_2513 | DM42_4512 | DM42_2513 | DM42_4512 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | annotation not available | 0.485 |
| DM42_2513 | argF | DM42_2513 | DM42_2515 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline | 0.459 |
| DM42_2513 | cbiT | DM42_2513 | DM42_22 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | cbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | 0.515 |
| DM42_2513 | cobJ | DM42_2513 | DM42_26 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | Cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase; Cobalamin biosynthesis protein CbiG; cobJ_cbiH: precorrin-3B C17-methyltransferase | 0.497 |
| DM42_2513 | gcvP | DM42_2513 | DM42_1634 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.451 |
| DM42_2513 | murB | DM42_2513 | DM42_2514 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | 0.722 |
| DM42_2513 | ppnP | DM42_2513 | DM42_6222 | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | Purine/pyrimidine-nucleoside phosphorylase; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions | 0.514 |
| DM42_2988 | DM42_2513 | DM42_2988 | DM42_2513 | annotation not available | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.407 |
| DM42_4512 | DM42_2513 | DM42_4512 | DM42_2513 | annotation not available | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.485 |
| argF | DM42_2513 | DM42_2515 | DM42_2513 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.459 |
| cbiT | DM42_2513 | DM42_22 | DM42_2513 | cbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.515 |
| cbiT | cobJ | DM42_22 | DM42_26 | cbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase; Cobalamin biosynthesis protein CbiG; cobJ_cbiH: precorrin-3B C17-methyltransferase | 0.999 |
| cobJ | DM42_2513 | DM42_26 | DM42_2513 | Cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase; Cobalamin biosynthesis protein CbiG; cobJ_cbiH: precorrin-3B C17-methyltransferase | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.497 |
| cobJ | cbiT | DM42_26 | DM42_22 | Cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase; Cobalamin biosynthesis protein CbiG; cobJ_cbiH: precorrin-3B C17-methyltransferase | cbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | 0.999 |
| gcvP | DM42_2513 | DM42_1634 | DM42_2513 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.451 |
| gcvP | murB | DM42_1634 | DM42_2514 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | 0.704 |
| murB | DM42_2513 | DM42_2514 | DM42_2513 | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.722 |
| murB | gcvP | DM42_2514 | DM42_1634 | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein | 0.704 |
| ppnP | DM42_2513 | DM42_6222 | DM42_2513 | Purine/pyrimidine-nucleoside phosphorylase; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions | Cyclic-di-gmp-binding protein; Belongs to the UPF0234 family | 0.514 |
