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rpmB protein (Burkholderia cepacia) - STRING interaction network
"rpmB" - L28: ribosomal protein L28 in Burkholderia cepacia
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
rpmBL28- ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family (77 aa)    
Predicted Functional Partners:
rpmG
rpmG_bact- ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family (55 aa)
 
 
  0.999
rpmE
L31- ribosomal protein L31 (86 aa)
 
 
  0.997
rplQ
L17- ribosomal protein L17 (131 aa)
 
 
  0.997
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
 
 
  0.996
rpmA
L27- ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (87 aa)
   
 
  0.996
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
 
  0.995
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
   
 
  0.995
rpmF
rpmF_bact- ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family (59 aa)
 
 
  0.995
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
   
 
  0.995
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (150 aa)
 
 
  0.995
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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