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DM42_3119 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3119" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3119annotation not available (468 aa)    
Predicted Functional Partners:
DM42_3118
annotation not available (291 aa)
 
   
  0.944
DM42_3117
annotation not available (262 aa)
 
   
  0.932
WI67_10495
annotation not available (81 aa)
 
          0.929
WL94_31035
annotation not available (579 aa)
 
     
  0.928
DM42_3116
annotation not available (331 aa)
 
          0.922
DM42_3115
Conserved hypothetical protein (92 aa)
 
          0.914
WL94_31040
annotation not available (256 aa)
          0.893
WL94_28160
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (320 aa)
 
   
  0.485
WI67_22265
annotation not available (281 aa)
 
   
  0.464
WL94_19220
annotation not available (303 aa)
 
   
  0.464
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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