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WL94_12840 protein (Burkholderia cepacia) - STRING interaction network
"WL94_12840" - tonB-siderophor: TonB-dependent siderophore receptor family protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_12840tonB-siderophor- TonB-dependent siderophore receptor family protein (839 aa)    
Predicted Functional Partners:
DM42_339
annotation not available (327 aa)
 
   
  0.807
WL94_12850
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (169 aa)
 
        0.736
WL94_12835
annotation not available (229 aa)
 
          0.650
DM42_4531
tonB_Cterm- TonB family C-terminal domain protein (271 aa)
 
 
  0.606
WL94_06195
annotation not available (677 aa)
 
 
  0.525
DM42_2868
tonB_Cterm- TonB family C-terminal domain protein (97 aa)
   
 
  0.515
DM42_848
tonB_Cterm- TonB family C-terminal domain protein (163 aa)
   
 
  0.511
WI67_09155
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (233 aa)
   
 
  0.511
tolA
tolA_full- protein TolA (351 aa)
   
 
  0.511
DM42_5771
annotation not available (503 aa)
 
   
  0.412
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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