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DM42_3894 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3894" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3894Conserved hypothetical protein (193 aa)    
Predicted Functional Partners:
WL94_08570
annotation not available (791 aa)
 
          0.964
DM42_3895
annotation not available (248 aa)
 
          0.940
WI67_22580
annotation not available (121 aa)
 
          0.830
WI67_22575
annotation not available (319 aa)
              0.786
DM42_7404
Conserved hypothetical protein (122 aa)
   
          0.726
WL94_27345
annotation not available (416 aa)
   
          0.714
DM42_7262
Conserved hypothetical protein (92 aa)
   
          0.693
DM42_4098
annotation not available (702 aa)
   
          0.646
WI67_00835
Uncharacterized protein (120 aa)
   
          0.629
DM42_6992
Conserved hypothetical protein (86 aa)
   
          0.607
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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