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DM42_3963 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3963" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3963annotation not available (365 aa)    
Predicted Functional Partners:
DM42_3964
Conserved hypothetical protein (415 aa)
 
          0.875
WI67_09880
annotation not available (558 aa)
 
   
  0.775
DM42_1061
annotation not available (983 aa)
 
 
  0.653
WL94_09300
annotation not available (355 aa)
              0.565
DM42_3966
annotation not available (280 aa)
              0.546
WL94_17275
annotation not available (294 aa)
   
        0.490
DM42_6789
annotation not available (127 aa)
 
   
  0.488
DM42_4214
annotation not available (127 aa)
 
   
  0.478
WL94_09310
annotation not available (271 aa)
              0.476
WL94_31635
annotation not available (383 aa)
   
  0.447
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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