• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DM42_3984 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3984" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3984annotation not available (111 aa)    
Predicted Functional Partners:
WL94_09370
annotation not available (385 aa)
              0.850
DM42_3985
annotation not available (191 aa)
 
          0.817
DM42_3986
annotation not available (520 aa)
 
     
  0.793
DM42_3989
annotation not available (487 aa)
 
        0.776
DM42_3987
annotation not available (559 aa)
              0.760
DM42_3988
FGGY family of carbohydrate kinase, N-terminal domain protein (513 aa)
              0.719
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)
   
          0.535
DM42_5951
hrpE_YscL_not- type III secretion apparatus protein, HrpE/YscL family (209 aa)
   
          0.513
DM42_1824
Conserved hypothetical protein (301 aa)
   
          0.506
DM42_7129
annotation not available (231 aa)
   
          0.440
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (15%) [HD]