WI67_21280 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Score

WI67_21280

Uncharacterized protein (193 aa)

Predicted Functional Partners:

WL94_26985

0.987

DM42_4236

0.904

WL94_09035

0.501

DM42_3917

0.499

WI67_11530

0.440

WL94_14665

0.440

DM42_1416

0.434

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_1416	WI67_21280	DM42_1416	DM42_4234	2_5_ligase- 2’-5’ RNA ligase	Uncharacterized protein	0.434
DM42_1416	WL94_26985	DM42_1416	DM42_4235	2_5_ligase- 2’-5’ RNA ligase	annotation not available	0.411
DM42_3917	WI67_21280	DM42_3917	DM42_4234	annotation not available	Uncharacterized protein	0.499
DM42_3917	WL94_09035	DM42_3917	DM42_3915	annotation not available	annotation not available	0.994
DM42_3917	WL94_26985	DM42_3917	DM42_4235	annotation not available	annotation not available	0.425
DM42_4236	WI67_21280	DM42_4236	DM42_4234	annotation not available	Uncharacterized protein	0.904
DM42_4236	WL94_26985	DM42_4236	DM42_4235	annotation not available	annotation not available	0.920
WI67_11530	WI67_21280	DM42_2958	DM42_4234	annotation not available	Uncharacterized protein	0.440
WI67_11530	WL94_26985	DM42_2958	DM42_4235	annotation not available	annotation not available	0.576
WI67_21280	DM42_1416	DM42_4234	DM42_1416	Uncharacterized protein	2_5_ligase- 2’-5’ RNA ligase	0.434
WI67_21280	DM42_3917	DM42_4234	DM42_3917	Uncharacterized protein	annotation not available	0.499
WI67_21280	DM42_4236	DM42_4234	DM42_4236	Uncharacterized protein	annotation not available	0.904
WI67_21280	WI67_11530	DM42_4234	DM42_2958	Uncharacterized protein	annotation not available	0.440
WI67_21280	WL94_09035	DM42_4234	DM42_3915	Uncharacterized protein	annotation not available	0.501
WI67_21280	WL94_14665	DM42_4234	DM42_2318	Uncharacterized protein	annotation not available	0.440
WI67_21280	WL94_26985	DM42_4234	DM42_4235	Uncharacterized protein	annotation not available	0.987
WL94_09035	DM42_3917	DM42_3915	DM42_3917	annotation not available	annotation not available	0.994
WL94_09035	WI67_21280	DM42_3915	DM42_4234	annotation not available	Uncharacterized protein	0.501
WL94_14665	WI67_21280	DM42_2318	DM42_4234	annotation not available	Uncharacterized protein	0.440
WL94_14665	WL94_26985	DM42_2318	DM42_4235	annotation not available	annotation not available	0.576

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