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STRINGSTRING
czcB protein (Burkholderia cepacia) - STRING interaction network
"czcB" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcBannotation not available (488 aa)    
Predicted Functional Partners:
czcA
annotation not available (1070 aa)
 
 
  0.991
WL94_14280
annotation not available (435 aa)
 
 
  0.981
WL94_14300
Sensor protein; Member of a two-component regulatory system (474 aa)
 
 
 
  0.788
WI67_20605
annotation not available (227 aa)
 
   
  0.644
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (677 aa)
   
 
  0.580
flgL
flagell_flgL- flagellar hook-associated protein 3 (411 aa)
           
  0.493
WL94_12545
annotation not available (384 aa)
   
 
  0.481
DM42_4858
annotation not available (378 aa)
 
 
  0.474
holB
holB- DNA polymerase III, delta’ subunit (342 aa)
           
  0.471
DM42_4912
Conserved hypothetical protein (99 aa)
   
          0.447
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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