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STRINGSTRING
DM42_444 protein (Burkholderia cepacia) - STRING interaction network
"DM42_444" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_444annotation not available (173 aa)    
Predicted Functional Partners:
WL94_10910
Uncharacterized protein (150 aa)
   
          0.715
DM42_1433
Conserved hypothetical protein (307 aa)
   
     
  0.692
DM42_5248
Conserved hypothetical protein (471 aa)
   
          0.679
DM42_3701
annotation not available (393 aa)
   
          0.677
DM42_5417
annotation not available (197 aa)
   
          0.642
mdcG
malonate_mdcG- malonate decarboxylase holo-[acyl-carrier-protein] synthase (222 aa)
 
          0.618
DM42_1640
Conserved hypothetical protein (360 aa)
   
          0.618
DM42_261
Conserved hypothetical protein (204 aa)
   
          0.610
DM42_1169
Autotrans_barl- outer membrane autotransporter barrel domain protein (1767 aa)
 
     
  0.603
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)
   
          0.600
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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