STRINGSTRING
atsA protein (Burkholderia cepacia) - STRING interaction network
"atsA" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsAannotation not available (656 aa)    
Predicted Functional Partners:
WL94_02210
annotation not available (349 aa)
 
 
 
  0.961
DM42_7025
annotation not available (711 aa)
         
    0.900
DM42_4519
annotation not available (270 aa)
   
   
  0.819
DM42_4518
annotation not available (328 aa)
              0.817
WL94_02225
annotation not available (108 aa)
              0.623
morB
annotation not available (370 aa)
           
  0.579
tauA
taurine_ABC_bnd- taurine ABC transporter, periplasmic binding protein (338 aa)
     
   
  0.556
WL94_02200
annotation not available (239 aa)
              0.526
betC
Chol_sulfatase- choline-sulfatase (511 aa)
     
  0.493
WL94_05520
annotation not available (427 aa)
           
  0.475
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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