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STRINGSTRING
DM42_4677 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4677" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4677annotation not available (363 aa)    
Predicted Functional Partners:
DM42_6504
annotation not available (528 aa)
   
          0.570
DM42_6505
annotation not available (579 aa)
 
          0.558
DM42_6507
annotation not available (308 aa)
 
          0.474
DM42_5567
Malic enzyme, N-terminal domain protein (575 aa)
 
          0.454
DM43_372
Uncharacterized protein (72 aa)
   
          0.449
DM42_4632
uvrD/REP helicase N-terminal domain protein (1142 aa)
         
  0.438
WI67_16400
Uncharacterized protein (68 aa)
   
          0.431
WI67_30465
annotation not available (61 aa)
   
          0.430
DM42_1826
annotation not available (261 aa)
   
          0.401
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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