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DM42_4909 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4909" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4909annotation not available (220 aa)    
Predicted Functional Partners:
DM42_4908
Conserved hypothetical protein (71 aa)
              0.543
DM42_4838
annotation not available (181 aa)
 
   
  0.529
DM42_4910
Conserved hypothetical protein (138 aa)
              0.501
DM42_4917
PEP_synth- phosphoenolpyruvate synthase (801 aa)
 
          0.497
DM42_3735
annotation not available (592 aa)
 
          0.480
WL94_07515
Adh_fam_2- zinc-binding alcohol dehydrogenase family protein (329 aa)
 
          0.459
DM42_4899
Conserved hypothetical protein (358 aa)
 
        0.456
WL94_17370
annotation not available (127 aa)
   
          0.451
WL94_30910
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (800 aa)
 
          0.447
DM42_4886
annotation not available (144 aa)
 
   
  0.442
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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