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DM42_5429 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5429" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5429annotation not available (322 aa)    
Predicted Functional Partners:
DM42_5428
annotation not available (434 aa)
              0.593
DM42_5427
Conserved hypothetical protein (497 aa)
 
          0.552
WL94_03650
annotation not available (299 aa)
   
          0.511
DM42_4303
annotation not available (303 aa)
   
          0.496
WL94_29460
annotation not available (295 aa)
   
          0.472
DM42_336
annotation not available (296 aa)
   
          0.451
WL94_33740
annotation not available (305 aa)
   
          0.445
DM42_5430
Conserved hypothetical protein (141 aa)
              0.411
DM42_6774
annotation not available (306 aa)
   
          0.401
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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