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DM42_5566 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5566" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5566Conserved hypothetical protein (1040 aa)    
Predicted Functional Partners:
DM42_5564
annotation not available (358 aa)
         
0.748
WL94_32475
Uncharacterized protein (384 aa)
 
          0.697
WL94_32470
Uncharacterized protein (381 aa)
 
          0.686
DM42_5567
Malic enzyme, N-terminal domain protein (575 aa)
 
     
0.675
DM42_3369
Conserved hypothetical protein (485 aa)
   
          0.668
DM42_5565
Conserved hypothetical protein (134 aa)
              0.665
WL94_32485
Uncharacterized protein (378 aa)
 
          0.644
DM42_5560
Conserved hypothetical protein (155 aa)
 
          0.622
WI67_30175
Uncharacterized protein (380 aa)
   
          0.621
DM42_3478
annotation not available (941 aa)
   
 
 
  0.594
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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