STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_38285annotation not available (549 aa)    
Predicted Functional Partners:
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein
  
0.999
DM42_5759
Isochor_syn: isochorismate synthase family protein
 
 0.996
rifR
annotation not available
  
 0.983
pchB
annotation not available
  
  
 0.918
DM42_4965
annotation not available
  
 0.907
VL15_05360
annotation not available
 
  
 0.905
DM42_5764
AA-adenyl-dom: amino acid adenylation domain protein
 
  
0.820
WL94_38265
Oxidoreductase; Thiaz-red: thiazolinyl imide reductase family protein
 
  
 0.800
WI67_29030
annotation not available
 
  
 0.750
WL94_28995
Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein
  
0.726
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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