STRINGSTRING
fptA protein (Burkholderia cepacia) - STRING interaction network
"fptA" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fptAannotation not available (726 aa)    
Predicted Functional Partners:
DM42_5771
annotation not available (503 aa)
 
   
  0.967
WL94_38235
MFS transporter; sider_RhtX_FptX- siderophore transporter, RhtX/FptX family protein (415 aa)
 
     
  0.881
DM42_5770
annotation not available (87 aa)
              0.848
pchB
annotation not available (101 aa)
 
   
  0.813
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1828 aa)
 
   
  0.809
WL94_38265
Oxidoreductase; Thiaz-red- thiazolinyl imide reductase family protein (350 aa)
 
   
  0.801
DM42_5764
AA-adenyl-dom- amino acid adenylation domain protein (1457 aa)
 
   
  0.713
DM42_5768
annotation not available (587 aa)
 
   
  0.709
WI67_29030
annotation not available (313 aa)
 
   
  0.708
DM42_339
annotation not available (327 aa)
 
   
  0.703
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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