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STRINGSTRING
DM43_319 protein (Burkholderia cepacia) - STRING interaction network
"DM43_319" - Uncharacterized protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM43_319Uncharacterized protein (83 aa)    
Predicted Functional Partners:
WL94_39685
annotation not available (121 aa)
   
          0.772
DM42_7152
Conserved hypothetical protein (125 aa)
   
          0.761
WL94_05175
annotation not available (94 aa)
   
          0.759
WI67_09185
annotation not available (205 aa)
   
          0.756
WL94_24800
Uncharacterized protein (126 aa)
   
          0.746
WI67_13265
ATPase (116 aa)
   
          0.744
WI67_21520
Uncharacterized protein (131 aa)
   
          0.743
WI67_28895
DUF1488 domain-containing protein (95 aa)
   
          0.736
WI67_24280
annotation not available (293 aa)
   
          0.730
DM42_3108
annotation not available (202 aa)
   
          0.729
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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