STRINGSTRING
DM42_5842 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5842" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5842annotation not available (386 aa)    
Predicted Functional Partners:
WL94_12355
Uncharacterized protein (138 aa)
   
          0.627
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1828 aa)
   
 
  0.583
dltA
Non-ribosomal peptide synthetase; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (3220 aa)
 
 
  0.574
WI67_28600
Uncharacterized protein (88 aa)
              0.565
WL94_28995
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1673 aa)
 
 
  0.554
WL94_10950
annotation not available (317 aa)
   
          0.552
DM42_4332
Glycosyltransferase family 28 N-terminal domain protein (413 aa)
 
 
      0.546
DM42_4965
annotation not available (453 aa)
 
 
  0.532
DM42_4961
Thioester-redct- thioester reductase domain protein (1188 aa)
 
 
  0.527
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)
   
          0.516
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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