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DM42_585 protein (Burkholderia cepacia) - STRING interaction network
"DM42_585" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_585Conserved hypothetical protein (89 aa)    
Predicted Functional Partners:
DM42_586
annotation not available (559 aa)
 
          0.976
DM42_584
annotation not available (291 aa)
 
          0.975
DM42_587
Conserved hypothetical protein (186 aa)
 
          0.967
DM42_588
Conserved hypothetical protein (412 aa)
 
          0.967
DM42_583
annotation not available (70 aa)
 
          0.940
DM42_582
annotation not available (248 aa)
 
          0.895
DM42_590
Conserved hypothetical protein (175 aa)
 
          0.813
DM42_591
annotation not available (146 aa)
 
          0.813
DM42_589
Conserved hypothetical protein (263 aa)
 
          0.810
DM42_653
Conserved hypothetical protein (125 aa)
   
          0.784
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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