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epaO protein (Burkholderia cepacia) - STRING interaction network
"epaO" - spaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epaOspaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)    
Predicted Functional Partners:
DM42_5958
annotation not available (261 aa)
 
   
  0.968
flgJ
flagell_FlgJ- flagellar rod assembly protein/muramidase FlgJ (329 aa)
   
   
  0.955
epaP
yscR- type III secretion apparatus protein, YscR/HrcR family (224 aa)
 
   
  0.950
DM42_5951
hrpE_YscL_not- type III secretion apparatus protein, HrpE/YscL family (209 aa)
 
 
  0.949
flgK
flgK_ends- flagellar hook-associated protein FlgK (643 aa)
   
 
  0.935
fliG
fliG- flagellar motor switch protein FliG (331 aa)
   
 
  0.924
fliM
fliM_switch- flagellar motor switch protein FliM (332 aa)
   
 
  0.900
DM42_5957
Conserved hypothetical protein (3799 aa)
 
          0.871
DM42_5945
type_III_yscC- type III secretion outer membrane pore, YscC/HrcC family (681 aa)
 
   
  0.863
DM42_7319
annotation not available (1380 aa)
   
 
  0.852
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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