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STRINGSTRING
DM42_6026 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6026" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6026Conserved hypothetical protein (199 aa)    
Predicted Functional Partners:
WI67_27725
annotation not available (473 aa)
 
        0.966
WL94_31270
annotation not available (402 aa)
   
          0.766
moaF
annotation not available (277 aa)
 
          0.757
WI67_27715
annotation not available (312 aa)
 
          0.727
WL94_31280
annotation not available (381 aa)
   
        0.727
DM42_3542
annotation not available (339 aa)
   
        0.712
WL94_29885
Uncharacterized protein (186 aa)
   
          0.702
WL94_38505
annotation not available (244 aa)
 
        0.678
DM42_70
annotation not available (341 aa)
   
          0.641
WL94_11795
annotation not available (468 aa)
 
        0.635
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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