Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOI86047.1 | AOI86048.1 | WI67_26965 | WI67_26970 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
AOI86047.1 | AOI86049.1 | WI67_26965 | WI67_26975 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
AOI86048.1 | AOI86047.1 | WI67_26970 | WI67_26965 | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
AOI86048.1 | AOI86049.1 | WI67_26970 | WI67_26975 | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
AOI86048.1 | ywhB | WI67_26970 | WI67_26980 | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.592 |
AOI86049.1 | AOI86047.1 | WI67_26975 | WI67_26965 | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
AOI86049.1 | AOI86048.1 | WI67_26975 | WI67_26970 | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
AOI86049.1 | ywhB | WI67_26975 | WI67_26980 | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.664 |
ywhB | AOI86048.1 | WI67_26980 | WI67_26970 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
ywhB | AOI86049.1 | WI67_26980 | WI67_26975 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.664 |