STRINGSTRING
DM42_6223 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6223" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6223annotation not available (108 aa)    
Predicted Functional Partners:
WL94_21230
annotation not available (121 aa)
   
          0.775
WI67_28590
annotation not available (108 aa)
   
          0.767
WI67_21715
Uncharacterized protein (114 aa)
   
          0.752
WI67_30100
Transcriptional regulator (72 aa)
   
          0.744
WI67_10370
Uncharacterized protein (163 aa)
   
          0.743
WI67_11060
Uncharacterized protein (88 aa)
   
          0.741
WI67_31195
Uncharacterized protein (127 aa)
   
          0.729
WL94_17225
Uncharacterized protein (267 aa)
   
          0.728
WI67_09215
Uncharacterized protein (120 aa)
   
          0.725
WI67_31660
Uncharacterized protein (180 aa)
   
          0.720
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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