STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msuEFMN_reduc_MsuE: FMN reductase (186 aa)    
Predicted Functional Partners:
sfnG
LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG
 
 0.980
DM42_4533
annotation not available
 
 0.945
ssuD
Alkanesulfonate monooxygenase, fmnh(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates
 
 0.942
ribF
Riboflavin kinase / fmn adenylyltransferase; Belongs to the ribF family
  
 
 0.912
cysH
Adenylylsulfate reductase, thioredoxin dependent family protein; Reduction of activated sulfate into sulfite. Uses adenylyl sulfate as substrate and thioredoxin as electron donor
   
 
 0.909
bluB
bluB: 5,6-dimethylbenzimidazole synthase
     
 0.907
DM42_6469
annotation not available
   
 
  0.903
DM42_4499
Fmn hydrolase / 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase; HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein
   
 
  0.901
ethe1
annotation not available
    
  0.901
DM42_3521
annotation not available
 
 0.900
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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