Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yoaE_2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
corC
Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
 0.904
AOI85507.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.818
AOI85832.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.818
AOI86119.1
Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.818
fusC
Fusaric acid resistance protein; Involved in the resistance (detoxification) of the fungal toxin fusaric acid; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.
      
 0.719
marC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.580
AOI82060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.557
nhaR
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.542
CitN
Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.422
citN_2
Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.422
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, Burkholderia sp. Bp7081, Burkholderia sp. Bp7091, Burkholderia sp. Bp7098, Burkholderia sp. Bp7108, Burkholderia sp. Bp7432, Burkholderia sp. LK29, Burkholderia sp. NCIM 5465, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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