Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOI83100.1 | AOI83101.1 | WI67_11915 | WI67_11920 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
AOI83100.1 | AOI83233.1 | WI67_11915 | WI67_12640 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
AOI83100.1 | AOI85495.1 | WI67_11915 | WI67_23900 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
AOI83100.1 | fumA | WI67_11915 | WI67_11925 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.473 |
AOI83100.1 | ywhB | WI67_11915 | WI67_26980 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.435 |
AOI83101.1 | AOI83100.1 | WI67_11920 | WI67_11915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
AOI83101.1 | fumA | WI67_11920 | WI67_11925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.728 |
AOI83233.1 | AOI83100.1 | WI67_12640 | WI67_11915 | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
AOI85495.1 | AOI83100.1 | WI67_23900 | WI67_11915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
fumA | AOI83100.1 | WI67_11925 | WI67_11915 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
fumA | AOI83101.1 | WI67_11925 | WI67_11920 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.728 |
ywhB | AOI83100.1 | WI67_26980 | WI67_11915 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |