STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOI84799.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)    
Predicted Functional Partners:
AOI84800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.718
AOI84801.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.568
NagE
PTS N-acetyl-D-glucosamine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.514
AOI84474.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.475
AOI85459.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.468
AOI81707.1
Polysaccharide pyruvyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.451
AOI86090.1
Bacterial sensory transduction regulator family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.426
AOI85342.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.420
AOI87126.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.406
AOI84473.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.404
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, Burkholderia sp. Bp7081, Burkholderia sp. Bp7091, Burkholderia sp. Bp7098, Burkholderia sp. Bp7108, Burkholderia sp. Bp7432, Burkholderia sp. LK29, Burkholderia sp. NCIM 5465, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.