Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AOI87116.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1179 aa)    
Predicted Functional Partners:
AOI85260.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
 
    0.622
AOI86428.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.509
AOI82049.1
Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.451
AOI84414.1
Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.450
AOI83581.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.449
AOI86669.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.443
AOI84388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.438
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 
 0.430
AOI84489.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.426
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, Burkholderia sp. Bp7081, Burkholderia sp. Bp7091, Burkholderia sp. Bp7098, Burkholderia sp. Bp7108, Burkholderia sp. Bp7432, Burkholderia sp. LK29, Burkholderia sp. NCIM 5465, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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